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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15817 and 15818 are separated by 421 nucleotides
15818 and 15819 are separated by 512 nucleotides
15819 and 15820 are separated by 717 nucleotides
15820 and 15821 are separated by 195 nucleotides
mRNA_7449: 15817 - BLAST GH19984 [Drosophila grimshawi], at 303,943 to 305,130
15817
mRNA_7450: 15818 - BLAST proteophosphoglycan protein, putative [Rhizoctonia so..., at 305,552 to 306,799
15818
mRNA_7451: 15819 - Hypothetical Protein, at 307,312 to 308,652
15819
mRNA_7452: 15820 - K14852 RRS1 regulator of ribosome biosynthesis, at 309,370 to 310,696
15820
mRNA_7453: 15821 - K14407 CSTF2, RNA15 cleavage stimulation factor subunit 2, at 310,892 to 312,649
15821
Group
Condition
mRNA
_7449
mRNA
_7450
mRNA
_7451
mRNA
_7452
mRNA
_7453
15817
15818
15819
15820
15821
growth on oleic acid
YNB Glucose
+0.2
-1.1
-0.0
N.D.
-2.5
growth on oleic acid
YNB Oleic Acid
+0.4
-1.4
+0.2
N.D.
-2.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.2
-0.1
N.D.
-2.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
-1.2
+0.1
N.D.
-1.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-1.7
+0.3
N.D.
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.5
-0.3
N.D.
-1.3
growth on ypd
YPD
-0.1
-0.8
-0.5
N.D.
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.7
+0.5
-0.0
N.D.
-1.9
auxotrophy
YNB Glucose 75mM Methionine
+0.9
+0.8
+0.0
N.D.
-2.3
auxotrophy
Dropout Complete
+0.6
-0.5
+0.3
N.D.
-0.8
auxotrophy
YNB Glucose
+0.8
-0.1
+0.3
N.D.
-1.3
auxotrophy
YNB Glucose 75mM Arginine
+0.9
-0.3
+0.1
N.D.
-1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-1.2
-0.1
N.D.
+1.2
growth on ricinoleic acid
YNB Glucose
+0.8
+0.1
-0.1
N.D.
-0.8
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.3
-0.4
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.9
-0.8
+0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.3
+0.1
N.D.
+0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.7
+0.4
-0.3
N.D.
+0.7
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.7
-0.2
N.D.
+0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
-0.6
-0.0
N.D.
+1.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
-0.3
+0.1
N.D.
+1.9
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