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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15824 and 15825 are separated by 1001 nucleotides
15825 and 15826 are separated by 511 nucleotides
15826 and 15827 are separated by 1499 nucleotides
15827 and 15828 are separated by 341 nucleotides
mRNA_7456: 15824 - Hypothetical Protein, at 316,330 to 316,788
15824
mRNA_7457: 15825 - Hypothetical Protein, at 317,790 to 319,145
15825
mRNA_7458: 15826 - BLAST proteophosphoglycan protein, putative [Rhizoctonia so..., at 319,657 to 320,898
15826
mRNA_7459: 15827 - K10997 TOF1, SWI1 replication fork protection complex subunit Tof1/Swi1, at 322,398 to 327,166
15827
mRNA_7460: 15828 - K00698 CHS1 chitin synthase, at 327,508 to 332,421
15828
Group
Condition
mRNA
_7456
mRNA
_7457
mRNA
_7458
mRNA
_7459
mRNA
_7460
15824
15825
15826
15827
15828
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-1.6
-0.3
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-1.6
+0.4
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.7
+0.0
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-1.1
+0.3
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
+0.1
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.1
-0.2
N.D.
N.D.
auxotrophy
Dropout Complete
+0.2
-0.0
-0.2
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
-0.6
+0.0
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.5
-0.2
N.D.
N.D.
auxotrophy
YNB Glucose
+0.0
+0.2
-0.1
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.2
-0.1
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
+0.0
+0.2
-0.1
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.0
-0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
+0.3
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.2
+0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.0
+0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.1
+0.1
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
+0.7
-0.4
N.D.
N.D.
growth on ypd
YPD
-0.2
+0.6
+0.1
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.5
-0.0
N.D.
N.D.
growth on oleic acid
YNB Glucose
+0.3
+0.5
+0.5
N.D.
N.D.
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