Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15827 and 15828 are separated by 341 nucleotides15828 and 15829 are separated by 484 nucleotides15829 and 15830 are separated by 343 nucleotides15830 and 15831 are separated by 800 nucleotides mRNA_7459: 15827 - K10997 TOF1, SWI1 replication fork protection complex subunit Tof1/Swi1, at 322,398 to 327,166 15827 mRNA_7460: 15828 - K00698 CHS1 chitin synthase, at 327,508 to 332,421 15828 mRNA_7461: 15829 - K08964 mtnB methylthioribulose-1-phosphate dehydratase, at 332,906 to 334,515 15829 mRNA_7462: 15830 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 334,859 to 336,377 15830 mRNA_7463: 15831 - Hypothetical Protein, at 337,178 to 338,673 15831
Group Condition mRNA_7459 mRNA_7460 mRNA_7461 mRNA_7462 mRNA_7463
15827 15828 15829 15830 15831
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.7 -0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.1 -0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.1 +0.1 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.3 -0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.2 -0.1 -0.0
growth on ypd YPD N.D. N.D. -0.3 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.0 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.3 +0.2 -0.0
auxotrophy YNB Glucose N.D. N.D. +0.1 -0.1 -0.0
auxotrophy Dropout Complete N.D. N.D. +0.5 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.2 +0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.1 +0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 +0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.1 +0.2 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.2 +0.1 +0.2
growth on oleic acid YNB Glucose N.D. N.D. +0.2 +0.3 +0.0
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.8 -0.1 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.9 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.6 +0.0 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +1.3 +0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.9 +0.4 +0.4
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