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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15832 and 15833 are separated by 181 nucleotides
15833 and 15834 are separated by 538 nucleotides
15834 and 15835 are separated by 147 nucleotides
15835 and 15836 are separated by 350 nucleotides
mRNA_7464: 15832 - BLAST expressed protein [Schizophyllum commune H4-8], at 339,268 to 340,751
15832
mRNA_7465: 15833 - K08518 STXBP5, SRO7_77 syntaxin-binding protein 5, at 340,933 to 344,642
15833
mRNA_7466: 15834 - K17887 SNX25, MDM1 sorting nexin-25, at 345,181 to 349,645
15834
mRNA_7467: 15835 - Hypothetical Protein, at 349,793 to 351,109
15835
mRNA_7468: 15836 - Hypothetical Protein, at 351,460 to 352,308
15836
Group
Condition
mRNA
_7464
mRNA
_7465
mRNA
_7466
mRNA
_7467
mRNA
_7468
15832
15833
15834
15835
15836
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.3
-1.0
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.5
-0.2
-0.2
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.2
-0.4
+0.0
+0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.0
-0.6
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.6
-0.4
-0.1
+0.0
growth on ricinoleic acid
YNB Glucose
-0.9
+0.0
+0.3
+0.1
+0.2
growth on ypd
YPD
-0.0
-0.2
-0.0
+0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
-0.2
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.0
+0.5
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.0
+0.2
+0.1
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.1
+0.1
+0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.6
-0.1
+0.2
+0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.1
+0.6
+0.0
+0.3
auxotrophy
Dropout Complete
+0.3
-0.2
+0.2
+0.0
+0.2
growth on oleic acid
YNB Oleic Acid
-0.2
-0.0
+0.5
+0.2
+0.3
auxotrophy
YNB Glucose
+0.3
+0.0
+0.1
+0.0
+0.4
growth on oleic acid
YNB Glucose
-0.1
-0.1
+0.5
+0.1
+0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.3
+0.3
+0.1
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
+0.5
-0.4
-0.1
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.0
+0.2
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.8
-0.2
-0.1
+0.2
+0.5
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