Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15834 and 15835 are separated by 147 nucleotides15835 and 15836 are separated by 350 nucleotides15836 and 15837 are separated by 193 nucleotides15837 and 15838 are separated by 78 nucleotides mRNA_7466: 15834 - K17887 SNX25, MDM1 sorting nexin-25, at 345,181 to 349,645 15834 mRNA_7467: 15835 - Hypothetical Protein, at 349,793 to 351,109 15835 mRNA_7468: 15836 - Hypothetical Protein, at 351,460 to 352,308 15836 mRNA_7469: 15837 - K20403 TTI1 TELO2-interacting protein 1, at 352,502 to 356,237 15837 mRNA_7470: 15838 - K12815 DHX38, PRP16 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16, at 356,316 to 361,042 15838
Group Condition mRNA_7466 mRNA_7467 mRNA_7468 mRNA_7469 mRNA_7470
15834 15835 15836 15837 15838
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.1 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.6 -0.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 +0.0 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 -0.3 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.0 +0.4 N.D. N.D.
growth on ypd YPD -0.0 +0.0 -0.0 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.1 +0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.2 +0.5 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.0 -0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 +0.0 N.D. N.D.
auxotrophy YNB Glucose +0.1 +0.0 +0.4 N.D. N.D.
auxotrophy Dropout Complete +0.2 +0.0 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 +0.5 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.3 +0.1 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.1 +0.4 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 +0.6 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +0.0 +0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.5 +0.2 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 +0.9 N.D. N.D.
growth on oleic acid YNB Glucose +0.5 +0.1 +0.5 N.D. N.D.
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