Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15837 and 15838 are separated by 78 nucleotides15838 and 15839 are separated by 472 nucleotides15839 and 15840 are separated by 1040 nucleotides15840 and 15841 are separated by 833 nucleotides mRNA_7469: 15837 - K20403 TTI1 TELO2-interacting protein 1, at 352,502 to 356,237 15837 mRNA_7470: 15838 - K12815 DHX38, PRP16 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16, at 356,316 to 361,042 15838 mRNA_7471: 15839 - K00838 ARO8 aromatic amino acid aminotransferase I, at 361,515 to 364,061 15839 mRNA_7472: 15840 - K03680 EIF2B4 translation initiation factor eIF-2B subunit delta, at 365,102 to 366,661 15840 mRNA_7473: 15841 - Hypothetical Protein, at 367,495 to 368,778 15841
Group Condition mRNA_7469 mRNA_7470 mRNA_7471 mRNA_7472 mRNA_7473
15837 15838 15839 15840 15841
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.2 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.2 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.5 N.D. +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.4 N.D. -0.4
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.3 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.5 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.0 N.D. +0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.3 N.D. +0.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.1 N.D. +0.4
growth on ypd YPD N.D. N.D. -0.0 N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.2 N.D. +0.1
auxotrophy Dropout Complete N.D. N.D. -0.2 N.D. +0.5
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.2 N.D. +0.5
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.2 N.D. +0.5
auxotrophy YNB Glucose N.D. N.D. -0.2 N.D. +0.6
growth on oleic acid YNB Glucose N.D. N.D. -0.1 N.D. +0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.5 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.3 N.D. +0.7
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