Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15838 and 15839 are separated by 472 nucleotides15839 and 15840 are separated by 1040 nucleotides15840 and 15841 are separated by 833 nucleotides15841 and 15842 are separated by 276 nucleotides mRNA_7470: 15838 - K12815 DHX38, PRP16 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16, at 356,316 to 361,042 15838 mRNA_7471: 15839 - K00838 ARO8 aromatic amino acid aminotransferase I, at 361,515 to 364,061 15839 mRNA_7472: 15840 - K03680 EIF2B4 translation initiation factor eIF-2B subunit delta, at 365,102 to 366,661 15840 mRNA_7473: 15841 - Hypothetical Protein, at 367,495 to 368,778 15841 mRNA_7474: 15842 - HMMPfam-Glycosyl transferases group 1-PF00534,HMMPfam-Starch synthase catalytic domain-PF08323,SUPERFAMILY--SSF53756, at 369,055 to 372,143 15842
Group Condition mRNA_7470 mRNA_7471 mRNA_7472 mRNA_7473 mRNA_7474
15838 15839 15840 15841 15842
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 N.D. +0.1 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 N.D. -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 N.D. -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 N.D. -0.4 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 N.D. +0.1 -0.3
growth on ypd YPD N.D. -0.0 N.D. +0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.5 N.D. -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 N.D. -0.4 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 N.D. +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 N.D. +0.4 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 N.D. +0.4 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 N.D. +0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 N.D. +0.5 +0.3
growth on oleic acid YNB Oleic Acid N.D. -0.3 N.D. +0.4 +0.6
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 N.D. +0.5 +0.3
growth on oleic acid YNB Glucose N.D. -0.1 N.D. +0.5 +0.3
auxotrophy Dropout Complete N.D. -0.2 N.D. +0.5 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 N.D. -0.1 +1.2
growth on ricinoleic acid YNB Glucose N.D. -0.3 N.D. +0.6 +0.6
auxotrophy YNB Glucose N.D. -0.2 N.D. +0.6 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 N.D. +0.7 +1.2
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