Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15839 and 15840 are separated by 1040 nucleotides
15840 and 15841 are separated by 833 nucleotides
15841 and 15842 are separated by 276 nucleotides
15842 and 15843 are separated by 2220 nucleotides
mRNA_7471: 15839 - K00838 ARO8 aromatic amino acid aminotransferase I, at 361,515 to 364,061
15839
mRNA_7472: 15840 - K03680 EIF2B4 translation initiation factor eIF-2B subunit delta, at 365,102 to 366,661
15840
mRNA_7473: 15841 - Hypothetical Protein, at 367,495 to 368,778
15841
mRNA_7474: 15842 - HMMPfam-Glycosyl transferases group 1-PF00534,HMMPfam-Starch synthase catalytic domain-PF08323,SUPERFAMILY--SSF53756, at 369,055 to 372,143
15842
mRNA_7475: 15843 - K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein, at 374,364 to 376,730
15843
Group
Condition
mRNA
_7471
mRNA
_7472
mRNA
_7473
mRNA
_7474
mRNA
_7475
15839
15840
15841
15842
15843
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
N.D.
+0.1
-0.8
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
+0.1
-0.3
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
+0.4
+0.2
-0.7
growth on ypd
YPD
-0.0
N.D.
+0.3
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
-0.1
-0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.0
N.D.
+0.2
+0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
-0.0
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
N.D.
-0.4
-0.2
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
+0.1
+0.4
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
N.D.
-0.4
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.3
N.D.
+0.6
+0.6
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
N.D.
+0.4
+0.4
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
N.D.
+0.5
+0.3
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
N.D.
-0.1
+1.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
N.D.
+0.5
+0.3
+0.3
auxotrophy
YNB Glucose
-0.2
N.D.
+0.6
+0.6
+0.1
auxotrophy
Dropout Complete
-0.2
N.D.
+0.5
+0.5
+0.5
growth on oleic acid
YNB Glucose
-0.1
N.D.
+0.5
+0.3
+0.7
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
+0.4
+0.6
+0.9
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
N.D.
-0.1
-0.3
+1.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
N.D.
+0.7
+1.2
+0.5
remove
mRNA_7471
plot
remove
mRNA_7472
plot
remove
mRNA_7473
remove
mRNA_7474
plot
remove
mRNA_7475
plot