Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15839 and 15840 are separated by 1040 nucleotides15840 and 15841 are separated by 833 nucleotides15841 and 15842 are separated by 276 nucleotides15842 and 15843 are separated by 2220 nucleotides mRNA_7471: 15839 - K00838 ARO8 aromatic amino acid aminotransferase I, at 361,515 to 364,061 15839 mRNA_7472: 15840 - K03680 EIF2B4 translation initiation factor eIF-2B subunit delta, at 365,102 to 366,661 15840 mRNA_7473: 15841 - Hypothetical Protein, at 367,495 to 368,778 15841 mRNA_7474: 15842 - HMMPfam-Glycosyl transferases group 1-PF00534,HMMPfam-Starch synthase catalytic domain-PF08323,SUPERFAMILY--SSF53756, at 369,055 to 372,143 15842 mRNA_7475: 15843 - K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein, at 374,364 to 376,730 15843
Group Condition mRNA_7471 mRNA_7472 mRNA_7473 mRNA_7474 mRNA_7475
15839 15840 15841 15842 15843
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.1 -0.8 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.1 -0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. +0.4 +0.2 -0.7
growth on ypd YPD -0.0 N.D. +0.3 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.1 -0.0 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. +0.2 +0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. -0.0 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 N.D. -0.4 -0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.1 +0.4 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. -0.4 +0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.3 N.D. +0.6 +0.6 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 N.D. +0.4 +0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. +0.5 +0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. -0.1 +1.2 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.5 +0.3 +0.3
auxotrophy YNB Glucose -0.2 N.D. +0.6 +0.6 +0.1
auxotrophy Dropout Complete -0.2 N.D. +0.5 +0.5 +0.5
growth on oleic acid YNB Glucose -0.1 N.D. +0.5 +0.3 +0.7
growth on oleic acid YNB Oleic Acid -0.3 N.D. +0.4 +0.6 +0.9
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 N.D. -0.1 -0.3 +1.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. +0.7 +1.2 +0.5
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