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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15843 and 15844 are separated by 1424 nucleotides
15844 and 15845 are separated by 366 nucleotides
15845 and 15846 are separated by 246 nucleotides
15846 and 15847 are separated by 205 nucleotides
mRNA_7475: 15843 - K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein, at 374,364 to 376,730
15843
mRNA_7476: 15844 - K07243 FTR, FTH1, efeU high-affinity iron transporter, at 378,155 to 380,112
15844
mRNA_7477: 15845 - K07243 FTR, FTH1, efeU high-affinity iron transporter, at 380,479 to 382,307
15845
mRNA_7478: 15846 - Hypothetical Protein, at 382,554 to 382,817
15846
mRNA_7479: 15847 - Hypothetical Protein, at 383,023 to 384,509
15847
Group
Condition
mRNA
_7475
mRNA
_7476
mRNA
_7477
mRNA
_7478
mRNA
_7479
15843
15844
15845
15846
15847
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
-0.8
+0.0
-0.5
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.8
-0.0
-0.5
+0.0
growth on ricinoleic acid
YNB Glucose
-0.7
-0.9
+0.3
-0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.4
-0.4
-0.4
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.5
+0.0
-0.4
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.8
+0.5
-0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
-1.1
-0.3
+0.4
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.2
+0.0
+0.2
-0.2
growth on ypd
YPD
-0.3
+0.1
-0.0
+0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.9
+0.5
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.8
+0.5
+0.1
-0.4
auxotrophy
YNB Glucose
+0.1
-0.8
+0.5
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.2
+0.1
-0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.3
+0.0
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.3
-0.1
+0.8
+0.0
auxotrophy
Dropout Complete
+0.5
-0.5
+0.5
+0.1
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.1
+0.4
+0.1
-0.1
growth on oleic acid
YNB Glucose
+0.7
-0.6
+0.5
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
+0.9
+0.1
+0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.2
+0.2
-0.1
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+1.5
+0.2
-0.1
+0.1
+0.0
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