Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15848 and 15849 are separated by 196 nucleotides15849 and 15850 are separated by 461 nucleotides15850 and 15851 are separated by 328 nucleotides15851 and 15852 are separated by 1268 nucleotides mRNA_7480: 15848 - K01868 TARS, thrS threonyl-tRNA synthetase, at 384,633 to 387,547 15848 mRNA_7481: 15849 - HMMPfam-Mitochondrial domain of unknown function (DUF1713)-PF08213, at 387,744 to 389,157 15849 mRNA_7482: 15850 - Hypothetical Protein, at 389,619 to 390,464 15850 mRNA_7483: 15851 - HMMPfam-Stress-induced bacterial acidophilic repeat motif-PF10685, at 390,793 to 391,582 15851 mRNA_7484: 15852 - K09565 PPIF peptidyl-prolyl isomerase F (cyclophilin D), at 392,851 to 393,989 15852
Group Condition mRNA_7480 mRNA_7481 mRNA_7482 mRNA_7483 mRNA_7484
15848 15849 15850 15851 15852
ypd buoyancy 40 hrs No Buoyancy Separation -2.5 N.D. -0.1 N.D. -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +0.1 N.D. -0.5
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. -0.1 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. +0.3 N.D. -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. +0.1 N.D. +0.1
growth on ypd YPD +0.4 N.D. -0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 N.D. -0.5 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. +0.3 N.D. +0.1
auxotrophy Dropout Complete +0.2 N.D. +0.1 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy +1.2 N.D. +0.2 N.D. -0.8
growth on oleic acid YNB Glucose -0.1 N.D. +0.2 N.D. +0.5
growth on oleic acid YNB Oleic Acid -0.0 N.D. +0.1 N.D. +0.5
growth on ricinoleic acid YNB Glucose +0.3 N.D. +0.6 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.5 N.D. +0.3 N.D. -0.1
auxotrophy YNB Glucose +0.3 N.D. +0.5 N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.8 N.D. +0.5 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 N.D. +0.8 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.7 N.D. +0.7 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.1 N.D. +0.1 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +1.4 N.D. +0.3 N.D. -0.1
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