Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15849 and 15850 are separated by 461 nucleotides
15850 and 15851 are separated by 328 nucleotides
15851 and 15852 are separated by 1268 nucleotides
15852 and 15853 are separated by 911 nucleotides
mRNA_7481: 15849 - HMMPfam-Mitochondrial domain of unknown function (DUF1713)-PF08213, at 387,744 to 389,157
15849
mRNA_7482: 15850 - Hypothetical Protein, at 389,619 to 390,464
15850
mRNA_7483: 15851 - HMMPfam-Stress-induced bacterial acidophilic repeat motif-PF10685, at 390,793 to 391,582
15851
mRNA_7484: 15852 - K09565 PPIF peptidyl-prolyl isomerase F (cyclophilin D), at 392,851 to 393,989
15852
mRNA_7485: 15853 - K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein, at 394,901 to 397,101
15853
Group
Condition
mRNA
_7481
mRNA
_7482
mRNA
_7483
mRNA
_7484
mRNA
_7485
15849
15850
15851
15852
15853
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
N.D.
-0.5
-0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
N.D.
-0.8
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.5
N.D.
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
N.D.
-0.7
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.3
N.D.
-0.5
-0.3
growth on ypd
YPD
N.D.
-0.2
N.D.
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
N.D.
+0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.3
N.D.
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
N.D.
+0.1
-0.4
auxotrophy
Dropout Complete
N.D.
+0.1
N.D.
+0.3
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
N.D.
+0.5
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.5
N.D.
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.3
N.D.
-0.1
-0.0
growth on oleic acid
YNB Glucose
N.D.
+0.2
N.D.
+0.5
-0.5
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.3
N.D.
+0.1
-0.2
growth on ricinoleic acid
YNB Glucose
N.D.
+0.6
N.D.
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.7
N.D.
-0.1
-0.2
auxotrophy
YNB Glucose
N.D.
+0.5
N.D.
+0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.8
N.D.
-0.1
+0.1
remove
mRNA_7481
plot
remove
mRNA_7482
plot
remove
mRNA_7483
remove
mRNA_7484
plot
remove
mRNA_7485
plot