Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15852 and 15853 are separated by 911 nucleotides15853 and 15854 are separated by 590 nucleotides15854 and 15855 are separated by 738 nucleotides15855 and 15856 are separated by 2483 nucleotides mRNA_7484: 15852 - K09565 PPIF peptidyl-prolyl isomerase F (cyclophilin D), at 392,851 to 393,989 15852 mRNA_7485: 15853 - K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein, at 394,901 to 397,101 15853 mRNA_7486: 15854 - K08287 E2.7.12.1 dual-specificity kinase, at 397,692 to 399,920 15854 mRNA_7487: 15855 - K17619 MDP1 magnesium-dependent phosphatase 1, at 400,659 to 401,356 15855 mRNA_7488: 15856 - K00558 DNMT1, dcm DNA (cytosine-5)-methyltransferase 1, at 403,840 to 407,882 15856
Group Condition mRNA_7484 mRNA_7485 mRNA_7486 mRNA_7487 mRNA_7488
15852 15853 15854 15855 15856
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 -1.7 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 -1.5 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.3 -1.1 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 -2.0 N.D. +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.1 -0.7 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2 -1.2 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.8 -0.2 -0.0 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.6 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.0 -0.6 N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 -0.3 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.5 +0.6 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.5 -0.5 -0.2 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 +0.2 N.D. +0.0
growth on ypd YPD +0.1 -0.1 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 -0.2 N.D. +0.2
growth on oleic acid YNB Glucose +0.5 -0.5 +0.0 N.D. +0.3
auxotrophy Dropout Complete +0.3 -0.3 +0.6 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.2 +0.4 N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.2 +0.8 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.2 +0.8 N.D. +0.2
auxotrophy YNB Glucose +0.3 -0.2 +0.8 N.D. +0.2
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