Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15854 and 15855 are separated by 738 nucleotides15855 and 15856 are separated by 2483 nucleotides15856 and 15857 are separated by 148 nucleotides15857 and 15858 are separated by 87 nucleotides mRNA_7486: 15854 - K08287 E2.7.12.1 dual-specificity kinase, at 397,692 to 399,920 15854 mRNA_7487: 15855 - K17619 MDP1 magnesium-dependent phosphatase 1, at 400,659 to 401,356 15855 mRNA_7488: 15856 - K00558 DNMT1, dcm DNA (cytosine-5)-methyltransferase 1, at 403,840 to 407,882 15856 mRNA_7489: 15857 - K12351 SMPD2 sphingomyelin phosphodiesterase 2, at 408,031 to 409,638 15857 mRNA_7490: 15858 - K20167 TBC1D14 TBC1 domain family member 14, at 409,726 to 411,732 15858
Group Condition mRNA_7486 mRNA_7487 mRNA_7488 mRNA_7489 mRNA_7490
15854 15855 15856 15857 15858
facs on lipid accumulation Sorted Low BODIPY Gate -2.0 N.D. +0.4 -2.5 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -1.7 N.D. +0.3 -0.9 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 N.D. -0.3 -1.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.5 N.D. -0.1 +0.2 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 N.D. +0.1 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 N.D. -0.0 +0.2 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.6 N.D. -0.0 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. +0.2 -0.6 -0.1
growth on oleic acid YNB Glucose +0.0 N.D. +0.3 -0.4 -0.5
auxotrophy Dropout Complete +0.6 N.D. -0.0 -0.4 -0.5
growth on oleic acid YNB Oleic Acid -0.2 N.D. +0.0 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.2 N.D. +0.2 +0.5 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.8 N.D. +0.2 -0.3 -0.9
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. -0.1 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. +0.2 -0.1 -0.5
growth on ypd YPD -0.1 N.D. +0.1 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. +0.1 +0.7 -0.3
growth on ricinoleic acid YNB Glucose +0.8 N.D. +0.2 -0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 N.D. +0.1 -0.0 -0.4
auxotrophy YNB Glucose +0.8 N.D. +0.2 +0.2 -0.7
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.0 +0.1 +0.3
remove
mRNA_7486
plot
remove
mRNA_7487
plot
remove
mRNA_7488
remove
mRNA_7489
plot
remove
mRNA_7490
plot