Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15858 and 15859 are separated by 86 nucleotides15859 and 15860 are separated by 1065 nucleotides15860 and 15861 are separated by 271 nucleotides15861 and 15862 are separated by 125 nucleotides mRNA_7490: 15858 - K20167 TBC1D14 TBC1 domain family member 14, at 409,726 to 411,732 15858 mRNA_7491: 15859 - K19267 qorB NAD(P)H dehydrogenase (quinone), at 411,819 to 412,834 15859 mRNA_7492: 15860 - KOG2301 Voltage-gated Ca2+ channels, alpha1 subunits, at 413,900 to 421,307 15860 mRNA_7493: 15861 - K00489 CYP7A1 cholesterol 7alpha-monooxygenase, at 421,579 to 423,387 15861 mRNA_7494: 15862 - K05760 PXN paxillin, at 423,513 to 425,436 15862
Group Condition mRNA_7490 mRNA_7491 mRNA_7492 mRNA_7493 mRNA_7494
15858 15859 15860 15861 15862
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.1 -0.3 -0.1 +0.1
auxotrophy Dropout Complete -0.5 -0.2 +0.1 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.9 +0.0 +0.0 +0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1 -0.0 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.3 -0.1 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 +0.3 -0.4 -0.3 +0.5
auxotrophy YNB Glucose -0.7 +0.1 -0.1 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.0 -0.0 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.3 -0.1 -0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.4 -0.1 +0.0 -0.0 +0.2
growth on oleic acid YNB Glucose -0.5 +0.3 -0.1 -0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.0 +0.2 -0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.0 +0.2 -0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.2 +0.1 -0.0 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 +0.1 -0.0 -0.0
growth on ypd YPD -0.0 -0.1 -0.3 +0.5 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.0 +0.4 +0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.1 +0.3 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 -0.2 +0.2 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.1 +0.1 +0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.5 +0.3 -0.2 +0.2
remove
mRNA_7490
plot
remove
mRNA_7491
plot
remove
mRNA_7492
remove
mRNA_7493
plot
remove
mRNA_7494
plot