Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15859 and 15860 are separated by 1065 nucleotides15860 and 15861 are separated by 271 nucleotides15861 and 15862 are separated by 125 nucleotides15862 and 15863 are separated by 519 nucleotides mRNA_7491: 15859 - K19267 qorB NAD(P)H dehydrogenase (quinone), at 411,819 to 412,834 15859 mRNA_7492: 15860 - KOG2301 Voltage-gated Ca2+ channels, alpha1 subunits, at 413,900 to 421,307 15860 mRNA_7493: 15861 - K00489 CYP7A1 cholesterol 7alpha-monooxygenase, at 421,579 to 423,387 15861 mRNA_7494: 15862 - K05760 PXN paxillin, at 423,513 to 425,436 15862 mRNA_7495: 15863 - K10089 M6PR cation-dependent mannose-6-phosphate receptor, at 425,956 to 427,400 15863
Group Condition mRNA_7491 mRNA_7492 mRNA_7493 mRNA_7494 mRNA_7495
15859 15860 15861 15862 15863
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.0 -0.3 -0.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.2 -0.0 +0.0 -1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 +0.0 +0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 -0.0 +0.0 -0.4
auxotrophy Dropout Complete -0.2 +0.1 +0.1 -0.2 -0.3
growth on ypd YPD -0.1 -0.3 +0.5 -0.0 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 -0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.3 -0.1 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 -0.0 -0.0 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 +0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 +0.2 +0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.0 +0.2 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.4 -0.3 +0.5 +0.2
auxotrophy YNB Glucose +0.1 -0.1 +0.2 -0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.3 -0.2 +0.2 -0.4
growth on oleic acid YNB Oleic Acid +0.1 +0.3 -0.3 +0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.2 -0.1 +0.2 +0.4
growth on oleic acid YNB Glucose +0.3 -0.1 -0.2 +0.3 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.4 +0.1 +0.1 +0.3
growth on ricinoleic acid YNB Glucose -0.1 +0.0 -0.0 +0.2 +0.9
remove
mRNA_7491
plot
remove
mRNA_7492
plot
remove
mRNA_7493
remove
mRNA_7494
plot
remove
mRNA_7495
plot