Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15865 and 15866 are separated by 224 nucleotides
15866 and 15867 are separated by 1832 nucleotides
15867 and 15868 are separated by 232 nucleotides
15868 and 15869 are separated by 1972 nucleotides
mRNA_7497: 15865 - K03685 rnc, DROSHA, RNT1 ribonuclease III, at 430,660 to 431,671
15865
mRNA_7498: 15866 - Hypothetical Protein, at 431,896 to 432,524
15866
mRNA_7499: 15867 - Hypothetical Protein, at 434,357 to 437,673
15867
mRNA_7500: 15868 - KOG2062 26S proteasome regulatory complex, subunit RPN2/PSMD1, at 437,906 to 438,768
15868
mRNA_7501: 15869 - Hypothetical Protein, at 440,741 to 441,957
15869
Group
Condition
mRNA
_7497
mRNA
_7498
mRNA
_7499
mRNA
_7500
mRNA
_7501
15865
15866
15867
15868
15869
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.0
+0.1
-3.6
+0.6
auxotrophy
Dropout Complete
-0.2
-0.1
-0.4
-1.3
-0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.5
-0.4
-0.9
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.2
+0.2
-0.8
-0.4
auxotrophy
YNB Glucose
+0.1
-0.1
+0.0
-1.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.2
-0.4
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.0
+0.0
-0.4
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
+0.3
-1.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
-0.1
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
+0.5
-0.3
-0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.1
+0.9
-1.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
+0.3
+0.3
-0.8
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
-0.0
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
-0.2
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
-0.3
-0.2
+0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
+0.2
+0.4
-0.5
-0.2
growth on oleic acid
YNB Glucose
+0.1
+0.4
+0.1
-0.4
+0.1
growth on ypd
YPD
+0.0
+0.6
-0.0
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.1
-0.1
+0.1
+0.0
growth on oleic acid
YNB Oleic Acid
+0.2
+0.6
-0.1
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
+0.5
-0.1
+0.2
+0.1
-0.1
remove
mRNA_7497
plot
remove
mRNA_7498
plot
remove
mRNA_7499
remove
mRNA_7500
plot
remove
mRNA_7501
plot