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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15870 and 15871 are separated by 938 nucleotides
15871 and 15872 are separated by 682 nucleotides
15872 and 15873 are separated by 67 nucleotides
15873 and 15874 are separated by 283 nucleotides
mRNA_7502: 15870 - K19788 OLA1 obg-like ATPase 1, at 444,835 to 446,831
15870
mRNA_7503: 15871 - Hypothetical Protein, at 447,770 to 449,407
15871
mRNA_7504: 15872 - KOG0621 Phospholipid scramblase, at 450,090 to 451,358
15872
mRNA_7505: 15873 - KOG3292 Predicted membrane protein, at 451,426 to 452,379
15873
mRNA_7506: 15874 - K15102 SLC25A3, PHC, PIC solute carrier family 25 (mitochondrial phosphate transporter), member 3, at 452,663 to 454,398
15874
Group
Condition
mRNA
_7502
mRNA
_7503
mRNA
_7504
mRNA
_7505
mRNA
_7506
15870
15871
15872
15873
15874
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.5
-0.6
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
-0.3
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
-0.4
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.5
+0.1
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.5
+0.1
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.3
+0.2
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.4
+0.2
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
+0.3
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.1
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
-0.2
N.D.
-0.1
growth on ypd
YPD
N.D.
+0.1
-0.3
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
+0.0
N.D.
+0.1
auxotrophy
Dropout Complete
N.D.
+0.1
+0.2
N.D.
-0.1
auxotrophy
YNB Glucose
N.D.
-0.2
+0.2
N.D.
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.0
+0.3
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
+0.1
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
-0.1
N.D.
+0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
+0.1
N.D.
+0.3
growth on oleic acid
YNB Glucose
N.D.
+0.1
+0.2
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
-0.0
N.D.
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
-0.1
N.D.
+0.4
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