Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15875 and 15876 are separated by 255 nucleotides
15876 and 15877 are separated by 239 nucleotides
15877 and 15878 are separated by 151 nucleotides
15878 and 15879 are separated by 259 nucleotides
mRNA_7507: 15875 - K17987 NBR1 next to BRCA1 gene 1 protein, at 454,869 to 457,717
15875
mRNA_7508: 15876 - SUPERFAMILY--SSF52047, at 457,973 to 459,421
15876
mRNA_7509: 15877 - K11548 NUF2, CDCA1 kinetochore protein Nuf2, at 459,661 to 461,495
15877
mRNA_7510: 15878 - K11644 SIN3A paired amphipathic helix protein Sin3a, at 461,647 to 466,734
15878
mRNA_7511: 15879 - K01507 ppa inorganic pyrophosphatase, at 466,994 to 468,563
15879
Group
Condition
mRNA
_7507
mRNA
_7508
mRNA
_7509
mRNA
_7510
mRNA
_7511
15875
15876
15877
15878
15879
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
N.D.
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.1
N.D.
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.1
N.D.
-0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.4
N.D.
-0.7
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.1
N.D.
-0.0
N.D.
growth on ypd
YPD
+0.1
-0.4
N.D.
+0.3
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.3
N.D.
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.6
N.D.
-0.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.2
N.D.
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
N.D.
+0.6
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.4
N.D.
-0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.5
N.D.
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.0
N.D.
+0.9
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.1
N.D.
+0.5
N.D.
growth on oleic acid
YNB Glucose
+0.2
+0.0
N.D.
+0.7
N.D.
auxotrophy
YNB Glucose
-0.1
-0.0
N.D.
+1.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.1
N.D.
+1.1
N.D.
auxotrophy
Dropout Complete
-0.1
+0.2
N.D.
+1.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.2
N.D.
+1.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.1
N.D.
+1.6
N.D.
growth on oleic acid
YNB Oleic Acid
-0.3
+0.5
N.D.
+1.3
N.D.
remove
mRNA_7507
plot
remove
mRNA_7508
plot
remove
mRNA_7509
remove
mRNA_7510
plot
remove
mRNA_7511
plot