Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15876 and 15877 are separated by 239 nucleotides15877 and 15878 are separated by 151 nucleotides15878 and 15879 are separated by 259 nucleotides15879 and 15880 are separated by 464 nucleotides mRNA_7508: 15876 - SUPERFAMILY--SSF52047, at 457,973 to 459,421 15876 mRNA_7509: 15877 - K11548 NUF2, CDCA1 kinetochore protein Nuf2, at 459,661 to 461,495 15877 mRNA_7510: 15878 - K11644 SIN3A paired amphipathic helix protein Sin3a, at 461,647 to 466,734 15878 mRNA_7511: 15879 - K01507 ppa inorganic pyrophosphatase, at 466,994 to 468,563 15879 mRNA_7512: 15880 - HMMPfam-ATP synthase E chain-PF05680, at 469,028 to 469,780 15880
Group Condition mRNA_7508 mRNA_7509 mRNA_7510 mRNA_7511 mRNA_7512
15876 15877 15878 15879 15880
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. -0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.4 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 N.D. -0.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.3 N.D. N.D.
growth on ypd YPD -0.4 N.D. +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -0.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. -0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.6 N.D. -0.4 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.4 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.5 N.D. -0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.6 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. +0.5 N.D. N.D.
growth on oleic acid YNB Glucose +0.0 N.D. +0.7 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. +0.9 N.D. N.D.
auxotrophy YNB Glucose -0.0 N.D. +1.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +1.1 N.D. N.D.
auxotrophy Dropout Complete +0.2 N.D. +1.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +1.2 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. +1.6 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.5 N.D. +1.3 N.D. N.D.
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