Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15877 and 15878 are separated by 151 nucleotides15878 and 15879 are separated by 259 nucleotides15879 and 15880 are separated by 464 nucleotides15880 and 15881 are separated by 265 nucleotides mRNA_7509: 15877 - K11548 NUF2, CDCA1 kinetochore protein Nuf2, at 459,661 to 461,495 15877 mRNA_7510: 15878 - K11644 SIN3A paired amphipathic helix protein Sin3a, at 461,647 to 466,734 15878 mRNA_7511: 15879 - K01507 ppa inorganic pyrophosphatase, at 466,994 to 468,563 15879 mRNA_7512: 15880 - HMMPfam-ATP synthase E chain-PF05680, at 469,028 to 469,780 15880 mRNA_7513: 15881 - KOG3267 Uncharacterized conserved protein, at 470,046 to 470,823 15881
Group Condition mRNA_7509 mRNA_7510 mRNA_7511 mRNA_7512 mRNA_7513
15877 15878 15879 15880 15881
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.7 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.6 N.D. N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 N.D. N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 N.D. N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 N.D. N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 N.D. N.D. -0.0
growth on ypd YPD N.D. +0.3 N.D. N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 N.D. N.D. +0.2
growth on oleic acid YNB Glucose N.D. +0.7 N.D. N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.5 N.D. N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.9 N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid N.D. +1.3 N.D. N.D. -0.1
growth on ricinoleic acid YNB Glucose N.D. +0.6 N.D. N.D. +0.8
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +1.1 N.D. N.D. +0.3
auxotrophy Dropout Complete N.D. +1.1 N.D. N.D. +0.4
auxotrophy YNB Glucose N.D. +1.1 N.D. N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +1.2 N.D. N.D. +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.6 N.D. N.D. +0.6
remove
mRNA_7509
plot		 remove
mRNA_7510
plot		 remove
mRNA_7511		 remove
mRNA_7512
plot		 remove
mRNA_7513
plot