Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15878 and 15879 are separated by 259 nucleotides15879 and 15880 are separated by 464 nucleotides15880 and 15881 are separated by 265 nucleotides15881 and 15882 are separated by 203 nucleotides mRNA_7510: 15878 - K11644 SIN3A paired amphipathic helix protein Sin3a, at 461,647 to 466,734 15878 mRNA_7511: 15879 - K01507 ppa inorganic pyrophosphatase, at 466,994 to 468,563 15879 mRNA_7512: 15880 - HMMPfam-ATP synthase E chain-PF05680, at 469,028 to 469,780 15880 mRNA_7513: 15881 - KOG3267 Uncharacterized conserved protein, at 470,046 to 470,823 15881 mRNA_7514: 15882 - K11757 PBRM1, PB1 protein polybromo-1, at 471,027 to 473,637 15882
Group Condition mRNA_7510 mRNA_7511 mRNA_7512 mRNA_7513 mRNA_7514
15878 15879 15880 15881 15882
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. N.D. -0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. N.D. -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 N.D. N.D. +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 N.D. N.D. -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. N.D. +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. N.D. -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. N.D. -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. N.D. -0.0 +0.1
growth on ypd YPD +0.3 N.D. N.D. -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. N.D. +0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.9 N.D. N.D. +0.1 -0.0
growth on oleic acid YNB Glucose +0.7 N.D. N.D. -0.2 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. N.D. +0.3 +0.2
auxotrophy Dropout Complete +1.1 N.D. N.D. +0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +1.1 N.D. N.D. +0.3 +0.1
growth on oleic acid YNB Oleic Acid +1.3 N.D. N.D. -0.1 +0.3
growth on ricinoleic acid YNB Glucose +0.6 N.D. N.D. +0.8 +0.2
auxotrophy YNB Glucose +1.1 N.D. N.D. +0.4 +0.1
auxotrophy YNB Glucose 75mM Methionine +1.2 N.D. N.D. +0.5 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +1.6 N.D. N.D. +0.6 +0.2
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