Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15882 and 15883 are separated by 349 nucleotides
15883 and 15884 are separated by 528 nucleotides
15884 and 15885 are separated by 238 nucleotides
15885 and 15886 are separated by 140 nucleotides
mRNA_7514: 15882 - K11757 PBRM1, PB1 protein polybromo-1, at 471,027 to 473,637
15882
mRNA_7515: 15883 - K07827 KRAS, KRAS2 GTPase KRas, at 473,987 to 475,256
15883
mRNA_7516: 15884 - HMMPfam-Protoglobin-PF11563, at 475,785 to 476,732
15884
mRNA_7517: 15885 - Hypothetical Protein, at 476,971 to 478,237
15885
mRNA_7518: 15886 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 478,378 to 480,820
15886
Group
Condition
mRNA
_7514
mRNA
_7515
mRNA
_7516
mRNA
_7517
mRNA
_7518
15882
15883
15884
15885
15886
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-1.0
-0.8
-0.1
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.2
-1.5
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-1.7
+0.2
-0.1
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.4
-0.2
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.1
-0.4
-0.2
+0.2
growth on ypd
YPD
+0.2
+0.1
-0.5
+0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
-0.2
-0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.7
-0.7
-0.3
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+1.3
-0.9
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.0
+0.2
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.3
+0.2
-0.0
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.0
+0.5
-0.1
+0.1
auxotrophy
Dropout Complete
-0.1
+1.0
-0.5
+0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.8
-0.2
+0.4
-0.4
growth on ricinoleic acid
YNB Glucose
+0.2
+1.2
-0.6
+0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.7
+0.2
+0.4
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+2.3
-1.1
+0.5
-0.4
auxotrophy
YNB Glucose
+0.1
+1.0
+0.4
+0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+3.0
-1.2
+0.3
-0.2
growth on oleic acid
YNB Oleic Acid
+0.3
+1.8
+0.3
+0.5
-0.4
growth on oleic acid
YNB Glucose
+0.5
+1.1
+0.8
+0.7
-0.3
remove
mRNA_7514
plot
remove
mRNA_7515
plot
remove
mRNA_7516
remove
mRNA_7517
plot
remove
mRNA_7518
plot