Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15886 and 15887 are separated by 419 nucleotides15887 and 15888 are separated by 657 nucleotides15888 and 15889 are separated by 115 nucleotides15889 and 15890 are separated by 1223 nucleotides mRNA_7518: 15886 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 478,378 to 480,820 15886 mRNA_7519: 15887 - HMMPfam-Protoglobin-PF11563, at 481,240 to 482,191 15887 mRNA_7520: 15888 - K18725 POM152 nucleoporin POM152, at 482,849 to 487,263 15888 mRNA_7521: 15889 - K18624 MAEA, EMP macrophage erythroblast attacher, at 487,379 to 489,204 15889 mRNA_7522: 15890 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 490,428 to 491,714 15890
Group Condition mRNA_7518 mRNA_7519 mRNA_7520 mRNA_7521 mRNA_7522
15886 15887 15888 15889 15890
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.9 +0.2 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.8 +0.5 -1.7 +0.7
growth on oleic acid YNB Oleic Acid -0.4 -1.3 +0.2 +0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 +0.2 -1.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 -0.1 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.9 +0.2 +0.0 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.9 +0.3 +0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.3 +0.1 -0.2 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 +0.1 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.5 -0.0 +0.1 +0.6
growth on ricinoleic acid YNB Glucose -0.3 -0.3 +0.2 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.3 +0.2 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.7 -0.1 -0.1 -0.5
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.5 +0.1 +0.1 +0.4
growth on ypd YPD -0.3 +0.1 +0.5 -0.3 +0.3
auxotrophy YNB Glucose -0.2 -0.1 +0.0 +0.1 +0.7
growth on oleic acid YNB Glucose -0.3 +0.2 +0.2 +0.2 +0.3
auxotrophy Dropout Complete -0.1 +0.5 -0.1 -0.3 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.4 +0.3 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +1.2 +0.4 -0.1 +1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +1.1 +0.5 +0.1 +0.9
remove
mRNA_7518
plot
remove
mRNA_7519
plot
remove
mRNA_7520
remove
mRNA_7521
plot
remove
mRNA_7522
plot