Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15887 and 15888 are separated by 657 nucleotides15888 and 15889 are separated by 115 nucleotides15889 and 15890 are separated by 1223 nucleotides15890 and 15891 are separated by 366 nucleotides mRNA_7519: 15887 - HMMPfam-Protoglobin-PF11563, at 481,240 to 482,191 15887 mRNA_7520: 15888 - K18725 POM152 nucleoporin POM152, at 482,849 to 487,263 15888 mRNA_7521: 15889 - K18624 MAEA, EMP macrophage erythroblast attacher, at 487,379 to 489,204 15889 mRNA_7522: 15890 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 490,428 to 491,714 15890 mRNA_7523: 15891 - KOG0143 Iron/ascorbate family oxidoreductases, at 492,081 to 493,296 15891
Group Condition mRNA_7519 mRNA_7520 mRNA_7521 mRNA_7522 mRNA_7523
15887 15888 15889 15890 15891
ypd buoyancy 40 hrs No Buoyancy Separation -1.9 +0.2 -0.2 -0.3 +0.0
growth on oleic acid YNB Oleic Acid -1.3 +0.2 +0.0 +0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.8 +0.5 -1.7 +0.7 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 -0.2 -0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 -1.3 +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.9 +0.3 +0.3 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.1 -0.1 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 -0.2 +0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.2 -0.1 +0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.1 +0.1 +0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.0 +0.1 +0.6 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 +0.2 +0.0 +0.6 +0.2
growth on ricinoleic acid YNB Glucose -0.3 +0.2 +0.1 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.1 -0.1 -0.5 +0.2
auxotrophy YNB Glucose -0.1 +0.0 +0.1 +0.7 -0.3
growth on ypd YPD +0.1 +0.5 -0.3 +0.3 +0.1
auxotrophy Dropout Complete +0.5 -0.1 -0.3 +0.6 -0.1
growth on oleic acid YNB Glucose +0.2 +0.2 +0.2 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.3 +0.2 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.2 +0.4 -0.1 +1.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.1 +0.5 +0.1 +0.9 +0.1
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