Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15897 and 15898 are separated by 677 nucleotides15898 and 15899 are separated by 346 nucleotides15899 and 15900 are separated by 128 nucleotides15900 and 15901 are separated by 87 nucleotides mRNA_7529: 15897 - Hypothetical Protein, at 501,522 to 502,180 15897 mRNA_7530: 15898 - Hypothetical Protein, at 502,858 to 503,836 15898 mRNA_7531: 15899 - K14001 SIL1, SLS1 nucleotide exchange factor SIL1, at 504,183 to 505,474 15899 mRNA_7532: 15900 - K01896 ACSM medium-chain acyl-CoA synthetase, at 505,603 to 507,822 15900 mRNA_7533: 15901 - K10885 XRCC5, KU80, G22P2 ATP-dependent DNA helicase 2 subunit 2, at 507,910 to 511,338 15901
Group Condition mRNA_7529 mRNA_7530 mRNA_7531 mRNA_7532 mRNA_7533
15897 15898 15899 15900 15901
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.1 N.D. -0.5 -1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.7 N.D. -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.1 N.D. -0.5 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.5 N.D. -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 N.D. -0.4 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 N.D. -0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 N.D. -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.3 N.D. -0.0 +0.1
auxotrophy Dropout Complete +0.3 -0.0 N.D. -0.3 -0.2
auxotrophy YNB Glucose -0.0 +0.1 N.D. +0.4 -0.6
growth on oleic acid YNB Oleic Acid -0.2 +0.1 N.D. +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 N.D. -0.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.0 N.D. -0.4 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.3 N.D. -0.1 +0.2
growth on ypd YPD +0.2 -0.0 N.D. -0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.4 N.D. +0.0 +0.4
growth on oleic acid YNB Glucose +0.1 -0.0 N.D. +0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.2 N.D. +0.4 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.0 N.D. -0.1 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 N.D. +0.2 +0.2
growth on ricinoleic acid YNB Glucose +0.3 +0.0 N.D. +0.4 +0.6
remove
mRNA_7529
plot
remove
mRNA_7530
plot
remove
mRNA_7531
remove
mRNA_7532
plot
remove
mRNA_7533
plot