Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15899 and 15900 are separated by 128 nucleotides15900 and 15901 are separated by 87 nucleotides15901 and 15902 are separated by 323 nucleotides15902 and 15903 are separated by 141 nucleotides mRNA_7531: 15899 - K14001 SIL1, SLS1 nucleotide exchange factor SIL1, at 504,183 to 505,474 15899 mRNA_7532: 15900 - K01896 ACSM medium-chain acyl-CoA synthetase, at 505,603 to 507,822 15900 mRNA_7533: 15901 - K10885 XRCC5, KU80, G22P2 ATP-dependent DNA helicase 2 subunit 2, at 507,910 to 511,338 15901 mRNA_7534: 15902 - K07304 msrA peptide-methionine (S)-S-oxide reductase, at 511,662 to 512,740 15902 mRNA_7535: 15903 - HMMPfam-Complex1_LYR-like-PF13232, at 512,882 to 513,517 15903
Group Condition mRNA_7531 mRNA_7532 mRNA_7533 mRNA_7534 mRNA_7535
15899 15900 15901 15902 15903
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 -1.0 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 -0.6 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 -0.3 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 -0.4 +0.3 N.D.
auxotrophy Dropout Complete N.D. -0.3 -0.2 -0.0 N.D.
auxotrophy YNB Glucose N.D. +0.4 -0.6 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.3 -0.0 N.D.
growth on ypd YPD N.D. -0.4 +0.3 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.1 -0.0 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.1 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.4 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.2 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.0 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.5 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 +0.4 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.2 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +0.2 -0.1 N.D.
growth on oleic acid YNB Glucose N.D. +0.3 -0.1 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 +0.2 -0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.4 +0.6 -0.2 N.D.
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