Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15901 and 15902 are separated by 323 nucleotides15902 and 15903 are separated by 141 nucleotides15903 and 15904 are separated by 231 nucleotides15904 and 15905 are separated by 126 nucleotides mRNA_7533: 15901 - K10885 XRCC5, KU80, G22P2 ATP-dependent DNA helicase 2 subunit 2, at 507,910 to 511,338 15901 mRNA_7534: 15902 - K07304 msrA peptide-methionine (S)-S-oxide reductase, at 511,662 to 512,740 15902 mRNA_7535: 15903 - HMMPfam-Complex1_LYR-like-PF13232, at 512,882 to 513,517 15903 mRNA_7536: 15904 - KOG2216 Conserved coiled/coiled coil protein, at 513,749 to 514,681 15904 mRNA_7537: 15905 - K13524 ABAT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 514,808 to 517,082 15905
Group Condition mRNA_7533 mRNA_7534 mRNA_7535 mRNA_7536 mRNA_7537
15901 15902 15903 15904 15905
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.1 N.D. -1.7 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.1 N.D. -1.6 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.3 N.D. -1.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 N.D. -0.3 -0.2
auxotrophy YNB Glucose -0.6 -0.2 N.D. +0.5 -0.3
growth on oleic acid YNB Oleic Acid -0.1 -0.2 N.D. -0.0 -0.2
growth on oleic acid YNB Glucose -0.1 +0.2 N.D. -0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 N.D. -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 N.D. -0.5 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.3 N.D. -0.5 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.0 N.D. +0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.2 N.D. +0.6 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 N.D. +0.2 -0.3
auxotrophy Dropout Complete -0.2 -0.0 N.D. +0.4 -0.3
growth on ypd YPD +0.3 -0.2 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. -0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 N.D. +0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 N.D. +0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 N.D. +0.7 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.3 N.D. +1.1 +0.3
growth on ricinoleic acid YNB Glucose +0.6 -0.2 N.D. +0.9 +0.5
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