Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15902 and 15903 are separated by 141 nucleotides15903 and 15904 are separated by 231 nucleotides15904 and 15905 are separated by 126 nucleotides15905 and 15906 are separated by 279 nucleotides mRNA_7534: 15902 - K07304 msrA peptide-methionine (S)-S-oxide reductase, at 511,662 to 512,740 15902 mRNA_7535: 15903 - HMMPfam-Complex1_LYR-like-PF13232, at 512,882 to 513,517 15903 mRNA_7536: 15904 - KOG2216 Conserved coiled/coiled coil protein, at 513,749 to 514,681 15904 mRNA_7537: 15905 - K13524 ABAT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 514,808 to 517,082 15905 mRNA_7538: 15906 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 517,362 to 518,534 15906
Group Condition mRNA_7534 mRNA_7535 mRNA_7536 mRNA_7537 mRNA_7538
15902 15903 15904 15905 15906
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -1.7 -0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -1.6 -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. -1.0 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.5 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -0.5 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. -0.3 -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.2 N.D. -0.0 -0.2 N.D.
growth on oleic acid YNB Glucose +0.2 N.D. -0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.3 -0.1 N.D.
growth on ypd YPD -0.2 N.D. +0.1 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.2 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.3 -0.3 N.D.
auxotrophy YNB Glucose -0.2 N.D. +0.5 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.0 -0.0 N.D.
auxotrophy Dropout Complete -0.0 N.D. +0.4 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.6 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.3 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.5 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.7 +0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. +1.1 +0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.2 N.D. +0.9 +0.5 N.D.
remove
mRNA_7534
plot		 remove
mRNA_7535
plot		 remove
mRNA_7536		 remove
mRNA_7537
plot		 remove
mRNA_7538
plot