Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15905 and 15906 are separated by 279 nucleotides15906 and 15907 are separated by 1411 nucleotides15907 and 15908 are separated by 212 nucleotides15908 and 15909 are separated by 218 nucleotides mRNA_7537: 15905 - K13524 ABAT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 514,808 to 517,082 15905 mRNA_7538: 15906 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 517,362 to 518,534 15906 mRNA_7539: 15907 - K07300 chaA, CAX Ca2+-H+ antiporter, at 519,946 to 522,544 15907 mRNA_7540: 15908 - K01012 bioB biotin synthase, at 522,757 to 524,526 15908 mRNA_7541: 15909 - K04564 SOD2 superoxide dismutase, Fe-Mn family, at 524,745 to 525,930 15909
Group Condition mRNA_7537 mRNA_7538 mRNA_7539 mRNA_7540 mRNA_7541
15905 15906 15907 15908 15909
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.1 N.D. -3.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.1 N.D. -2.4
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -0.2 N.D. -1.5
growth on oleic acid YNB Glucose -0.3 N.D. -0.2 N.D. -1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.1 N.D. -1.5
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. +0.0 N.D. -1.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. +0.3 N.D. -1.4
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. +0.1 N.D. -1.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. +0.1 N.D. -1.6
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.2 N.D. -1.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 N.D. -0.0 N.D. -0.5
auxotrophy YNB Glucose -0.3 N.D. +0.2 N.D. -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. +0.0 N.D. -0.9
growth on ricinoleic acid YNB Glucose +0.5 N.D. +0.1 N.D. -1.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.1 N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.2 N.D. -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.4 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 N.D. -0.1 N.D. -0.8
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -0.1 N.D. +0.1
auxotrophy Dropout Complete -0.3 N.D. +0.2 N.D. +0.5
growth on ypd YPD -0.1 N.D. +0.8 N.D. +0.2
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