Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15906 and 15907 are separated by 1411 nucleotides
15907 and 15908 are separated by 212 nucleotides
15908 and 15909 are separated by 218 nucleotides
15909 and 15910 are separated by 128 nucleotides
mRNA_7538: 15906 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 517,362 to 518,534
15906
mRNA_7539: 15907 - K07300 chaA, CAX Ca2+-H+ antiporter, at 519,946 to 522,544
15907
mRNA_7540: 15908 - K01012 bioB biotin synthase, at 522,757 to 524,526
15908
mRNA_7541: 15909 - K04564 SOD2 superoxide dismutase, Fe-Mn family, at 524,745 to 525,930
15909
mRNA_7542: 15910 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 526,059 to 527,753
15910
Group
Condition
mRNA
_7538
mRNA
_7539
mRNA
_7540
mRNA
_7541
mRNA
_7542
15906
15907
15908
15909
15910
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
N.D.
-3.2
+0.6
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
N.D.
-2.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
N.D.
-1.6
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.0
N.D.
-0.5
-1.3
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
N.D.
-1.3
-0.4
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
N.D.
-1.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.3
N.D.
-1.4
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
N.D.
-0.8
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
N.D.
-1.5
+0.6
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
N.D.
-1.2
-0.0
auxotrophy
YNB Glucose
N.D.
+0.2
N.D.
-1.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
N.D.
-1.5
+0.7
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.0
N.D.
-1.5
+0.7
growth on oleic acid
YNB Glucose
N.D.
-0.2
N.D.
-1.3
+0.8
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
N.D.
-0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
N.D.
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.0
N.D.
-0.9
+0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.4
N.D.
-0.1
+0.4
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
N.D.
-0.2
+0.5
auxotrophy
Dropout Complete
N.D.
+0.2
N.D.
+0.5
+0.4
growth on ypd
YPD
N.D.
+0.8
N.D.
+0.2
+0.2
remove
mRNA_7538
plot
remove
mRNA_7539
plot
remove
mRNA_7540
remove
mRNA_7541
plot
remove
mRNA_7542
plot