Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15909 and 15910 are separated by 128 nucleotides
15910 and 15911 are separated by 271 nucleotides
15911 and 15912 are separated by 292 nucleotides
15912 and 15913 are separated by 59 nucleotides
mRNA_7541: 15909 - K04564 SOD2 superoxide dismutase, Fe-Mn family, at 524,745 to 525,930
15909
mRNA_7542: 15910 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 526,059 to 527,753
15910
mRNA_7543: 15911 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 528,025 to 529,460
15911
mRNA_7544: 15912 - K07552 bcr MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein, at 529,753 to 531,940
15912
mRNA_7545: 15913 - Hypothetical Protein, at 532,000 to 532,304
15913
Group
Condition
mRNA
_7541
mRNA
_7542
mRNA
_7543
mRNA
_7544
mRNA
_7545
15909
15910
15911
15912
15913
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-3.2
+0.6
-0.3
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-2.4
-0.1
+0.7
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-1.1
-0.3
-0.0
+0.0
N.D.
auxotrophy
YNB Glucose
-1.0
-0.2
-0.1
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-1.3
-0.4
-0.0
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-1.2
-0.0
-0.2
+0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.4
-0.3
+0.2
+0.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-1.5
+0.7
+0.0
-0.4
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.6
-0.4
+0.4
+0.5
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-1.3
+0.8
-0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
-0.4
+0.2
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.5
+0.7
-0.1
+0.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-1.5
+0.6
+0.1
+0.2
N.D.
growth on oleic acid
YNB Glucose
-1.3
+0.8
+0.0
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.9
+0.7
-0.2
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.2
+0.2
+0.3
N.D.
growth on ypd
YPD
+0.2
+0.2
+0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.4
+0.0
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.2
+0.4
+0.3
N.D.
auxotrophy
Dropout Complete
+0.5
+0.4
-0.1
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
-0.2
+0.5
+0.2
+0.4
N.D.
remove
mRNA_7541
plot
remove
mRNA_7542
plot
remove
mRNA_7543
remove
mRNA_7544
plot
remove
mRNA_7545
plot