Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15912 and 15913 are separated by 59 nucleotides
15913 and 15914 are separated by 212 nucleotides
15914 and 15915 are separated by 642 nucleotides
15915 and 15916 are separated by 266 nucleotides
mRNA_7544: 15912 - K07552 bcr MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein, at 529,753 to 531,940
15912
mRNA_7545: 15913 - Hypothetical Protein, at 532,000 to 532,304
15913
mRNA_7546: 15914 - K04523 UBQLN, DSK2 ubiquilin, at 532,517 to 534,299
15914
mRNA_7547: 15915 - Hypothetical Protein, at 534,942 to 536,762
15915
mRNA_7548: 15916 - K08023 LTBP2_3_4 latent transforming growth factor beta binding protein 2/3/4, at 537,029 to 539,584
15916
Group
Condition
mRNA
_7544
mRNA
_7545
mRNA
_7546
mRNA
_7547
mRNA
_7548
15912
15913
15914
15915
15916
auxotrophy
YNB Glucose
-0.1
N.D.
-0.2
-0.2
-0.5
auxotrophy
Dropout Complete
+0.0
N.D.
-0.1
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
N.D.
-0.4
-0.5
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
-0.1
-0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
N.D.
-0.5
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.8
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
+0.0
-0.1
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
N.D.
-0.1
-0.0
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
N.D.
-0.1
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
N.D.
-0.4
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
+0.3
N.D.
-0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
N.D.
-0.5
-0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
-0.1
+0.1
-0.2
growth on oleic acid
YNB Oleic Acid
+0.4
N.D.
-0.0
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
N.D.
-0.3
+0.2
+0.0
growth on oleic acid
YNB Glucose
+0.2
N.D.
-0.0
-0.1
+0.2
growth on ypd
YPD
-0.1
N.D.
+0.4
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
N.D.
+0.2
-0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
+0.1
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
N.D.
+0.1
-0.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
+0.3
+0.3
+0.3
remove
mRNA_7544
plot
remove
mRNA_7545
plot
remove
mRNA_7546
remove
mRNA_7547
plot
remove
mRNA_7548
plot