Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15913 and 15914 are separated by 212 nucleotides15914 and 15915 are separated by 642 nucleotides15915 and 15916 are separated by 266 nucleotides15916 and 15917 are separated by 1644 nucleotides mRNA_7545: 15913 - Hypothetical Protein, at 532,000 to 532,304 15913 mRNA_7546: 15914 - K04523 UBQLN, DSK2 ubiquilin, at 532,517 to 534,299 15914 mRNA_7547: 15915 - Hypothetical Protein, at 534,942 to 536,762 15915 mRNA_7548: 15916 - K08023 LTBP2_3_4 latent transforming growth factor beta binding protein 2/3/4, at 537,029 to 539,584 15916 mRNA_7549: 15917 - Hypothetical Protein, at 541,229 to 541,762 15917
Group Condition mRNA_7545 mRNA_7546 mRNA_7547 mRNA_7548 mRNA_7549
15913 15914 15915 15916 15917
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 -0.3 -0.1 N.D.
auxotrophy YNB Glucose N.D. -0.2 -0.2 -0.5 N.D.
auxotrophy Dropout Complete N.D. -0.1 -0.1 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 -0.5 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.8 +0.0 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.1 -0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 -0.1 -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.5 -0.0 +0.2 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.1 -0.0 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.0 -0.2 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 +0.2 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.0 +0.1 N.D.
growth on oleic acid YNB Glucose N.D. -0.0 -0.1 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.1 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.0 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.2 -0.1 N.D.
growth on ypd YPD N.D. +0.4 +0.1 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 +0.3 +0.3 N.D.
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