Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15915 and 15916 are separated by 266 nucleotides
15916 and 15917 are separated by 1644 nucleotides
15917 and 15918 are separated by 151 nucleotides
15918 and 15919 are separated by 529 nucleotides
mRNA_7547: 15915 - Hypothetical Protein, at 534,942 to 536,762
15915
mRNA_7548: 15916 - K08023 LTBP2_3_4 latent transforming growth factor beta binding protein 2/3/4, at 537,029 to 539,584
15916
mRNA_7549: 15917 - Hypothetical Protein, at 541,229 to 541,762
15917
mRNA_7550: 15918 - ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SUPERFAMILY--SSF54427, at 541,914 to 542,318
15918
mRNA_7551: 15919 - KOG1032 Uncharacterized conserved protein, contains GRAM domain, at 542,848 to 546,528
15919
Group
Condition
mRNA
_7547
mRNA
_7548
mRNA
_7549
mRNA
_7550
mRNA
_7551
15915
15916
15917
15918
15919
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.1
N.D.
N.D.
-2.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
+0.2
N.D.
N.D.
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.1
N.D.
N.D.
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.1
N.D.
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.1
N.D.
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.2
N.D.
N.D.
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.2
N.D.
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.1
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.1
N.D.
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
N.D.
N.D.
-0.0
growth on oleic acid
YNB Oleic Acid
-0.2
+0.1
N.D.
N.D.
+0.3
auxotrophy
Dropout Complete
-0.1
-0.5
N.D.
N.D.
+1.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.2
N.D.
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.0
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.3
N.D.
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
N.D.
N.D.
+0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.4
N.D.
N.D.
+0.9
auxotrophy
YNB Glucose
-0.2
-0.5
N.D.
N.D.
+1.1
growth on ypd
YPD
+0.1
-0.1
N.D.
N.D.
+0.6
growth on oleic acid
YNB Glucose
-0.1
+0.2
N.D.
N.D.
+0.7
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
N.D.
N.D.
+1.2
remove
mRNA_7547
plot
remove
mRNA_7548
plot
remove
mRNA_7549
remove
mRNA_7550
plot
remove
mRNA_7551
plot