Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15916 and 15917 are separated by 1644 nucleotides15917 and 15918 are separated by 151 nucleotides15918 and 15919 are separated by 529 nucleotides15919 and 15920 are separated by 299 nucleotides mRNA_7548: 15916 - K08023 LTBP2_3_4 latent transforming growth factor beta binding protein 2/3/4, at 537,029 to 539,584 15916 mRNA_7549: 15917 - Hypothetical Protein, at 541,229 to 541,762 15917 mRNA_7550: 15918 - ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SUPERFAMILY--SSF54427, at 541,914 to 542,318 15918 mRNA_7551: 15919 - KOG1032 Uncharacterized conserved protein, contains GRAM domain, at 542,848 to 546,528 15919 mRNA_7552: 15920 - K11130 NOP10, NOLA3 H/ACA ribonucleoprotein complex subunit 3, at 546,828 to 547,296 15920
Group Condition mRNA_7548 mRNA_7549 mRNA_7550 mRNA_7551 mRNA_7552
15916 15917 15918 15919 15920
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. N.D. -2.7 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. N.D. -0.3 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. N.D. -0.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 N.D. N.D. +0.8 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. N.D. +0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. N.D. -0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. N.D. -0.4 +0.2
auxotrophy Dropout Complete -0.5 N.D. N.D. +1.0 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. N.D. -0.0 -0.1
auxotrophy YNB Glucose -0.5 N.D. N.D. +1.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. N.D. -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. N.D. +0.9 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. N.D. -0.2 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. N.D. +0.4 +0.3
growth on ypd YPD -0.1 N.D. N.D. +0.6 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.3 +1.0
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. +0.3 +0.5
growth on ricinoleic acid YNB Glucose -0.0 N.D. N.D. +1.2 -0.1
growth on oleic acid YNB Glucose +0.2 N.D. N.D. +0.7 +0.3
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