Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15918 and 15919 are separated by 529 nucleotides15919 and 15920 are separated by 299 nucleotides15920 and 15921 are separated by 423 nucleotides15921 and 15922 are separated by 126 nucleotides mRNA_7550: 15918 - ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SUPERFAMILY--SSF54427, at 541,914 to 542,318 15918 mRNA_7551: 15919 - KOG1032 Uncharacterized conserved protein, contains GRAM domain, at 542,848 to 546,528 15919 mRNA_7552: 15920 - K11130 NOP10, NOLA3 H/ACA ribonucleoprotein complex subunit 3, at 546,828 to 547,296 15920 mRNA_7553: 15921 - KOG4558 Uncharacterized conserved protein, at 547,720 to 548,858 15921 mRNA_7554: 15922 - K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase, at 548,985 to 552,468 15922
Group Condition mRNA_7550 mRNA_7551 mRNA_7552 mRNA_7553 mRNA_7554
15918 15919 15920 15921 15922
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -2.7 +0.1 +0.2 -2.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 +0.1 +0.1 -2.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.4 +0.0 -1.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 -0.4 +0.0 -1.8
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 +0.1 +0.3 -2.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 +0.2 +0.1 -1.5
growth on ricinoleic acid YNB Glucose N.D. +1.2 -0.1 -0.1 -2.6
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 +1.0 -0.2 -1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.4 -0.3 +0.2 +0.1
auxotrophy YNB Glucose N.D. +1.1 -0.5 -0.1 -0.8
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.2 +0.4 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +0.3 -0.1 -0.3
growth on oleic acid YNB Glucose N.D. +0.7 +0.3 +0.1 -1.1
growth on ypd YPD N.D. +0.6 +0.1 +0.3 -0.8
growth on oleic acid YNB Oleic Acid N.D. +0.3 +0.5 +0.1 -0.6
auxotrophy YNB Glucose 75mM Arginine N.D. +0.9 -0.3 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 -0.1 +0.0 +0.7
auxotrophy Dropout Complete N.D. +1.0 -0.4 -0.3 +0.6
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 +0.4 -0.0 +0.6
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.4 +0.3 +0.0 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.8 -0.7 +0.0 +1.3
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