Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15920 and 15921 are separated by 423 nucleotides15921 and 15922 are separated by 126 nucleotides15922 and 15923 are separated by 338 nucleotides15923 and 15924 are separated by 350 nucleotides mRNA_7552: 15920 - K11130 NOP10, NOLA3 H/ACA ribonucleoprotein complex subunit 3, at 546,828 to 547,296 15920 mRNA_7553: 15921 - KOG4558 Uncharacterized conserved protein, at 547,720 to 548,858 15921 mRNA_7554: 15922 - K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase, at 548,985 to 552,468 15922 mRNA_7555: 15923 - K00463 IDO, INDO indoleamine 2,3-dioxygenase, at 552,807 to 554,579 15923 mRNA_7556: 15924 - K12734 PPIL3 peptidyl-prolyl cis-trans isomerase-like 3, at 554,930 to 556,179 15924
Group Condition mRNA_7552 mRNA_7553 mRNA_7554 mRNA_7555 mRNA_7556
15920 15921 15922 15923 15924
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.3 -2.0 -0.0 -1.1
growth on ricinoleic acid YNB Glucose -0.1 -0.1 -2.6 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.0 -1.8 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.2 -2.2 -0.4 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 -2.2 +0.0 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.0 -1.5 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 -1.5 -0.1 -0.6
auxotrophy YNB Glucose -0.5 -0.1 -0.8 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +1.0 -0.2 -1.4 +0.1 -1.2
growth on oleic acid YNB Glucose +0.3 +0.1 -1.1 -0.3 -0.3
growth on oleic acid YNB Oleic Acid +0.5 +0.1 -0.6 -0.5 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 -0.1 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.4 -0.3 +0.1 -0.6
auxotrophy Dropout Complete -0.4 -0.3 +0.6 -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.7 +0.0 +1.3 -0.5 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.1 -0.3 +0.1 -0.3
growth on ypd YPD +0.1 +0.3 -0.8 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.2 +0.1 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 +0.7 +0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.0 +0.6 +0.2 -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.0 +0.3 +0.1 +0.2
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