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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15923 and 15924 are separated by 350 nucleotides
15924 and 15925 are separated by 101 nucleotides
15925 and 15926 are separated by 2352 nucleotides
15926 and 15927 are separated by 249 nucleotides
mRNA_7555: 15923 - K00463 IDO, INDO indoleamine 2,3-dioxygenase, at 552,807 to 554,579
15923
mRNA_7556: 15924 - K12734 PPIL3 peptidyl-prolyl cis-trans isomerase-like 3, at 554,930 to 556,179
15924
mRNA_7557: 15925 - Hypothetical Protein, at 556,281 to 558,919
15925
mRNA_7558: 15926 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 561,272 to 563,698
15926
mRNA_7559: 15927 - HMMPfam-PLAC8 family-PF04749,TIGRFAM-A_thal_Cys_rich uncharacterized Cys-rich domain-TIGR01571, at 563,948 to 564,897
15927
Group
Condition
mRNA
_7555
mRNA
_7556
mRNA
_7557
mRNA
_7558
mRNA
_7559
15923
15924
15925
15926
15927
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-1.1
-1.0
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.5
-0.2
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.6
-0.6
+0.0
-0.4
growth on oleic acid
YNB Oleic Acid
-0.5
-0.5
-0.2
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.1
-0.3
-0.2
-0.6
growth on oleic acid
YNB Glucose
-0.3
-0.3
-0.2
-0.1
-0.4
auxotrophy
Dropout Complete
-0.4
+0.2
-0.3
-0.3
-0.5
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.4
-1.2
-0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
-0.2
-0.2
-0.3
auxotrophy
YNB Glucose
-0.1
-0.3
+0.1
-0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-1.2
+0.2
+0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.2
-0.5
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.5
-0.4
-0.1
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.0
+0.7
-0.5
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.6
+0.1
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.0
-0.4
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
+0.4
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.3
+0.4
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
+0.5
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
+0.4
+0.1
+0.2
growth on ypd
YPD
-0.1
+0.4
+0.3
+0.2
+0.0
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