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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15924 and 15925 are separated by 101 nucleotides
15925 and 15926 are separated by 2352 nucleotides
15926 and 15927 are separated by 249 nucleotides
15927 and 15928 are separated by 408 nucleotides
mRNA_7556: 15924 - K12734 PPIL3 peptidyl-prolyl cis-trans isomerase-like 3, at 554,930 to 556,179
15924
mRNA_7557: 15925 - Hypothetical Protein, at 556,281 to 558,919
15925
mRNA_7558: 15926 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 561,272 to 563,698
15926
mRNA_7559: 15927 - HMMPfam-PLAC8 family-PF04749,TIGRFAM-A_thal_Cys_rich uncharacterized Cys-rich domain-TIGR01571, at 563,948 to 564,897
15927
mRNA_7560: 15928 - K12346 SMF metal iron transporter, at 565,306 to 568,103
15928
Group
Condition
mRNA
_7556
mRNA
_7557
mRNA
_7558
mRNA
_7559
mRNA
_7560
15924
15925
15926
15927
15928
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
-1.0
-0.3
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
-0.6
+0.0
-0.4
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.2
-0.2
-0.5
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.4
-1.2
-0.0
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
-0.2
-0.6
N.D.
growth on oleic acid
YNB Oleic Acid
-0.5
-0.2
-0.2
-0.2
N.D.
growth on oleic acid
YNB Glucose
-0.3
-0.2
-0.1
-0.4
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-1.2
+0.2
+0.2
-0.0
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.5
-0.4
-0.1
+0.0
N.D.
auxotrophy
Dropout Complete
+0.2
-0.3
-0.3
-0.5
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.5
-0.3
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
+0.1
-0.2
-0.1
N.D.
auxotrophy
YNB Glucose
-0.3
+0.1
-0.1
-0.4
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.2
-0.2
-0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.4
-0.1
+0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.7
-0.5
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.4
-0.1
+0.0
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
+0.4
-0.2
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.5
+0.1
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.4
+0.1
+0.2
N.D.
growth on ypd
YPD
+0.4
+0.3
+0.2
+0.0
N.D.
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