Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15926 and 15927 are separated by 249 nucleotides15927 and 15928 are separated by 408 nucleotides15928 and 15929 are separated by 702 nucleotides15929 and 15930 are separated by 830 nucleotides mRNA_7558: 15926 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 561,272 to 563,698 15926 mRNA_7559: 15927 - HMMPfam-PLAC8 family-PF04749,TIGRFAM-A_thal_Cys_rich uncharacterized Cys-rich domain-TIGR01571, at 563,948 to 564,897 15927 mRNA_7560: 15928 - K12346 SMF metal iron transporter, at 565,306 to 568,103 15928 mRNA_7561: 15929 - KOG2290 Rhomboid family proteins, at 568,806 to 571,438 15929 mRNA_7562: 15930 - K18753 ZFP36L butyrate response factor 1, at 572,269 to 575,015 15930
Group Condition mRNA_7558 mRNA_7559 mRNA_7560 mRNA_7561 mRNA_7562
15926 15927 15928 15929 15930
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.4 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.6 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.5 N.D. N.D. N.D.
auxotrophy Dropout Complete -0.3 -0.5 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 N.D. N.D. N.D.
growth on oleic acid YNB Glucose -0.1 -0.4 N.D. N.D. N.D.
auxotrophy YNB Glucose -0.1 -0.4 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.4 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.2 -0.2 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.2 -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 N.D. N.D. N.D.
growth on ypd YPD +0.2 +0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 N.D. N.D. N.D.
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