Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15932 and 15933 are separated by 423 nucleotides15933 and 15934 are separated by 47 nucleotides15934 and 15935 are separated by 702 nucleotides15935 and 15936 are separated by 829 nucleotides mRNA_7564: 15932 - K03138 TFIIF1, GTF2F1, TFG1 transcription initiation factor TFIIF subunit alpha, at 577,074 to 579,231 15932 mRNA_7565: 15933 - KOG0029 Amine oxidase, at 579,655 to 580,246 15933 mRNA_7566: 15934 - K12347 SLC11A, NRAMP natural resistance-associated macrophage protein, at 580,294 to 582,534 15934 mRNA_7567: 15935 - KOG2290 Rhomboid family proteins, at 583,237 to 585,869 15935 mRNA_7568: 15936 - K18753 ZFP36L butyrate response factor 1, at 586,699 to 589,279 15936
Group Condition mRNA_7564 mRNA_7565 mRNA_7566 mRNA_7567 mRNA_7568
15932 15933 15934 15935 15936
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. N.D. -2.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. N.D. -1.7
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. N.D. -1.6
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. N.D. -1.6
auxotrophy YNB Glucose N.D. N.D. N.D. N.D. -1.6
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. N.D. -1.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. N.D. -1.1
growth on ypd YPD N.D. N.D. N.D. N.D. -0.8
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. N.D. -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. N.D. -0.6
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. N.D. -0.5
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. N.D. +0.2
auxotrophy Dropout Complete N.D. N.D. N.D. N.D. +0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. N.D. +0.5
growth on oleic acid YNB Glucose N.D. N.D. N.D. N.D. +0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. N.D. +1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. N.D. +1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. N.D. +1.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. N.D. +1.5
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