Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15939 and 15940 are separated by 356 nucleotides15940 and 15941 are separated by 566 nucleotides15941 and 15942 are separated by 246 nucleotides15942 and 15943 are separated by 572 nucleotides mRNA_7571: 15939 - K11450 KDM1A, AOF2, LSD1 lysine-specific histone demethylase 1A, at 594,088 to 595,626 15939 mRNA_7572: 15940 - Hypothetical Protein, at 595,983 to 596,534 15940 mRNA_7573: 15941 - KOG0331 ATP-dependent RNA helicase, at 597,101 to 600,100 15941 mRNA_7574: 15942 - K15275 SLC35B1 solute carrier family 35 (UDP-galactose transporter), member B1, at 600,347 to 601,742 15942 mRNA_7575: 15943 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-Tetratricopeptide repeat-PF13371,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 602,315 to 604,765 15943
Group Condition mRNA_7571 mRNA_7572 mRNA_7573 mRNA_7574 mRNA_7575
15939 15940 15941 15942 15943
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.4 -0.5 +0.1 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -1.0 -0.0 N.D. +0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -1.1 +0.2 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -1.1 +0.3 N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -1.2 +0.2 N.D. -0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.8 +0.4 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 +0.4 +0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 +0.6 +0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.4 +1.4 +0.3 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate +1.3 -1.1 -0.3 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.3 +0.2 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.5 +0.1 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate +1.5 -0.5 -0.5 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +1.2 +0.3 N.D. -0.1
growth on ypd YPD +0.5 +0.7 +0.3 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy +1.1 +1.0 +0.0 N.D. -0.1
auxotrophy Dropout Complete +1.3 +1.0 +0.3 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 +1.7 +0.1 N.D. +0.3
auxotrophy YNB Glucose +1.0 +1.4 +0.1 N.D. +0.1
growth on oleic acid YNB Oleic Acid +1.1 +1.2 +0.0 N.D. +0.3
growth on oleic acid YNB Glucose +1.0 +2.1 -0.0 N.D. +0.1
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