Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15946 and 15947 are separated by 381 nucleotides15947 and 15948 are separated by 332 nucleotides15948 and 15949 are separated by 410 nucleotides15949 and 15950 are separated by 855 nucleotides mRNA_7578: 15946 - KOG2512 Beta-tubulin folding cofactor C, at 606,736 to 607,935 15946 mRNA_7579: 15947 - K03952 NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8, at 608,317 to 609,498 15947 mRNA_7580: 15948 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 609,831 to 611,279 15948 mRNA_7581: 15949 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 611,690 to 614,027 15949 mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614,883 to 616,136 15950
Group Condition mRNA_7578 mRNA_7579 mRNA_7580 mRNA_7581 mRNA_7582
15946 15947 15948 15949 15950
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. -0.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. +0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. -0.3 +0.1
growth on ypd YPD N.D. N.D. N.D. +0.5 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. +0.1 -0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. +0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. +0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. +0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. -0.0 +0.2
auxotrophy Dropout Complete N.D. N.D. N.D. -0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. +0.3 +0.1
auxotrophy YNB Glucose N.D. N.D. N.D. +0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. +0.2 +0.3
growth on oleic acid YNB Glucose N.D. N.D. N.D. +0.3 +0.3
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. +0.2 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.2 +0.4
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