Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15947 and 15948 are separated by 332 nucleotides15948 and 15949 are separated by 410 nucleotides15949 and 15950 are separated by 855 nucleotides15950 and 15951 are separated by 61 nucleotides mRNA_7579: 15947 - K03952 NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8, at 608,317 to 609,498 15947 mRNA_7580: 15948 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 609,831 to 611,279 15948 mRNA_7581: 15949 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 611,690 to 614,027 15949 mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614,883 to 616,136 15950 mRNA_7583: 15951 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 616,198 to 617,544 15951
Group Condition mRNA_7579 mRNA_7580 mRNA_7581 mRNA_7582 mRNA_7583
15947 15948 15949 15950 15951
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.3 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.2 -0.2 -0.4
growth on ypd YPD N.D. N.D. +0.5 -0.5 -0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.1 +0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.0 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.0 -0.4 +0.4
auxotrophy Dropout Complete N.D. N.D. -0.0 +0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.3 -0.2 +0.2
auxotrophy YNB Glucose N.D. N.D. +0.1 +0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.2 +0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.3 +0.1 +0.9
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.3 +0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.4 -0.1 +1.3
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.1 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.1 -0.1 +0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.0 +0.2 +0.6
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.1 -0.0 +0.9
growth on oleic acid YNB Glucose N.D. N.D. +0.3 +0.3 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.0 -0.0 +1.0
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.2 +0.4 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.2 +0.4 +0.8
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