Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15948 and 15949 are separated by 410 nucleotides
15949 and 15950 are separated by 855 nucleotides
15950 and 15951 are separated by 61 nucleotides
15951 and 15952 are separated by 294 nucleotides
mRNA_7580: 15948 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 609,831 to 611,279
15948
mRNA_7581: 15949 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 611,690 to 614,027
15949
mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614,883 to 616,136
15950
mRNA_7583: 15951 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 616,198 to 617,544
15951
mRNA_7584: 15952 - KOG0546 HSP90 co-chaperone CPR7/Cyclophilin, at 617,839 to 618,826
15952
Group
Condition
mRNA
_7580
mRNA
_7581
mRNA
_7582
mRNA
_7583
mRNA
_7584
15948
15949
15950
15951
15952
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
+0.3
-0.1
-1.7
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.0
-0.1
-0.1
-0.8
growth on ypd
YPD
N.D.
+0.5
-0.5
-0.4
-0.2
auxotrophy
YNB Glucose
N.D.
+0.1
+0.3
-0.0
-1.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.3
-0.2
+0.0
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.0
-0.4
+0.4
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.3
+0.1
+0.3
-0.7
auxotrophy
Dropout Complete
N.D.
-0.0
+0.2
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.3
-0.2
+0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
-0.2
-0.4
+0.6
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
+0.0
-0.3
+0.7
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+0.2
+0.5
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.3
+0.1
+0.9
-0.0
growth on oleic acid
YNB Glucose
N.D.
+0.3
+0.3
+0.4
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
+0.4
+0.6
-0.5
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
-0.0
+0.9
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
-0.0
+1.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.0
+0.2
+0.6
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.4
-0.1
+1.3
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
-0.1
+0.8
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.2
+0.4
+0.8
+0.2
remove
mRNA_7580
plot
remove
mRNA_7581
plot
remove
mRNA_7582
remove
mRNA_7583
plot
remove
mRNA_7584
plot