Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15949 and 15950 are separated by 855 nucleotides15950 and 15951 are separated by 61 nucleotides15951 and 15952 are separated by 294 nucleotides15952 and 15953 are separated by 193 nucleotides mRNA_7581: 15949 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 611,690 to 614,027 15949 mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614,883 to 616,136 15950 mRNA_7583: 15951 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 616,198 to 617,544 15951 mRNA_7584: 15952 - KOG0546 HSP90 co-chaperone CPR7/Cyclophilin, at 617,839 to 618,826 15952 mRNA_7585: 15953 - K03650 mnmE, trmE, MSS1 tRNA modification GTPase, at 619,020 to 621,044 15953
Group Condition mRNA_7581 mRNA_7582 mRNA_7583 mRNA_7584 mRNA_7585
15949 15950 15951 15952 15953
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.1 -0.1 -0.8 -0.9
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.3 -0.1 -1.7 +0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 +0.0 +0.3 -0.1
auxotrophy YNB Glucose +0.1 +0.3 -0.0 -1.0 +0.3
growth on ypd YPD +0.5 -0.5 -0.4 -0.2 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.1 +0.3 -0.7 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.2 +0.2 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.4 +0.4 -0.2 +0.3
growth on oleic acid YNB Oleic Acid +0.2 +0.4 +0.6 -0.5 -0.7
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.2 -0.4 +0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 -0.3 +0.7 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 +0.9 -0.0 -0.4
auxotrophy Dropout Complete -0.0 +0.2 -0.1 -0.1 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.2 +0.5 -0.4 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.0 +1.0 -0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.1 -0.0 +0.9 -0.1 -0.0
growth on oleic acid YNB Glucose +0.3 +0.3 +0.4 -0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.1 +1.3 +0.7 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.2 +0.6 +0.4 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 +0.8 +0.6 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.4 +0.8 +0.2 +0.4
remove
mRNA_7581
plot
remove
mRNA_7582
plot
remove
mRNA_7583
remove
mRNA_7584
plot
remove
mRNA_7585
plot