Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15950 and 15951 are separated by 61 nucleotides15951 and 15952 are separated by 294 nucleotides15952 and 15953 are separated by 193 nucleotides15953 and 15954 are separated by 128 nucleotides mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614,883 to 616,136 15950 mRNA_7583: 15951 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 616,198 to 617,544 15951 mRNA_7584: 15952 - KOG0546 HSP90 co-chaperone CPR7/Cyclophilin, at 617,839 to 618,826 15952 mRNA_7585: 15953 - K03650 mnmE, trmE, MSS1 tRNA modification GTPase, at 619,020 to 621,044 15953 mRNA_7586: 15954 - HMMPfam-Cytochrome oxidase c assembly-PF14880, at 621,173 to 621,587 15954
Group Condition mRNA_7582 mRNA_7583 mRNA_7584 mRNA_7585 mRNA_7586
15950 15951 15952 15953 15954
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 -0.8 -0.9 -0.0
growth on ypd YPD -0.5 -0.4 -0.2 +0.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.4 -0.2 +0.3 -0.6
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.1 -1.7 +0.6 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 -0.7 +0.0 +0.0
auxotrophy YNB Glucose +0.3 -0.0 -1.0 +0.3 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 +0.3 -0.1 -0.3
growth on oleic acid YNB Oleic Acid +0.4 +0.6 -0.5 -0.7 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.3 +0.7 -0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.9 -0.0 -0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.4 +0.6 +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.2 -0.3 -0.1 +0.4
auxotrophy Dropout Complete +0.2 -0.1 -0.1 +0.5 -0.2
growth on ricinoleic acid YNB Glucose -0.0 +0.9 -0.1 -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.5 -0.4 +0.3 +0.2
growth on oleic acid YNB Glucose +0.3 +0.4 -0.3 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +1.0 -0.1 -0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +1.3 +0.7 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.8 +0.6 +0.4 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.8 +0.2 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.6 +0.4 +0.5 +0.5
remove
mRNA_7582
plot
remove
mRNA_7583
plot
remove
mRNA_7584
remove
mRNA_7585
plot
remove
mRNA_7586
plot