Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15953 and 15954 are separated by 128 nucleotides15954 and 15955 are separated by 111 nucleotides15955 and 15956 are separated by 206 nucleotides15956 and 15957 are separated by 192 nucleotides mRNA_7585: 15953 - K03650 mnmE, trmE, MSS1 tRNA modification GTPase, at 619,020 to 621,044 15953 mRNA_7586: 15954 - HMMPfam-Cytochrome oxidase c assembly-PF14880, at 621,173 to 621,587 15954 mRNA_7587: 15955 - HMMPfam-Protein of unknown function (DUF2413)-PF10310, at 621,699 to 623,748 15955 mRNA_7588: 15956 - Hypothetical Protein, at 623,955 to 629,387 15956 mRNA_7589: 15957 - K19785 POF1 nicotinamide-nucleotide adenylyltransferase, at 629,580 to 630,504 15957
Group Condition mRNA_7585 mRNA_7586 mRNA_7587 mRNA_7588 mRNA_7589
15953 15954 15955 15956 15957
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.0 +0.4 -1.1 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.6 +0.4 -1.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.0 -0.0 +0.7 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.5 -0.5 -1.3 +0.2
auxotrophy Dropout Complete +0.5 -0.2 +0.3 -0.7 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.3 -0.3 -0.5 -0.3
growth on oleic acid YNB Oleic Acid -0.7 -0.2 +0.4 -0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 -0.3 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.0 +0.1 -0.5 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.6 +0.4 +0.1 -0.8 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 +0.4 -0.2 +0.4
auxotrophy YNB Glucose +0.3 +0.1 +0.2 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.4 -0.2 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 +0.1 +0.2 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.4 +0.8 -0.4 -0.1
growth on ypd YPD +0.4 -0.4 -0.1 +0.7 +0.2
growth on oleic acid YNB Glucose +0.2 +0.1 +0.5 -0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 +0.1 +0.3 +0.2
growth on ricinoleic acid YNB Glucose -0.0 -0.1 +0.4 +0.8 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.5 +1.0 +0.8 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.3 +1.1 +0.3 +0.2
remove
mRNA_7585
plot
remove
mRNA_7586
plot
remove
mRNA_7587
remove
mRNA_7588
plot
remove
mRNA_7589
plot