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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15955 and 15956 are separated by 206 nucleotides
15956 and 15957 are separated by 192 nucleotides
15957 and 15958 are separated by 82 nucleotides
15958 and 15959 are separated by 83 nucleotides
mRNA_7587: 15955 - HMMPfam-Protein of unknown function (DUF2413)-PF10310, at 621,699 to 623,748
15955
mRNA_7588: 15956 - Hypothetical Protein, at 623,955 to 629,387
15956
mRNA_7589: 15957 - K19785 POF1 nicotinamide-nucleotide adenylyltransferase, at 629,580 to 630,504
15957
mRNA_7590: 15958 - Hypothetical Protein, at 630,587 to 632,557
15958
mRNA_7591: 15959 - Hypothetical Protein, at 632,641 to 636,261
15959
Group
Condition
mRNA
_7587
mRNA
_7588
mRNA
_7589
mRNA
_7590
mRNA
_7591
15955
15956
15957
15958
15959
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-1.3
+0.2
-0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-1.1
-0.7
+0.2
-0.1
auxotrophy
Dropout Complete
+0.3
-0.7
-0.3
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.5
-0.3
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.8
-0.3
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-1.3
+0.1
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
+0.2
-0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.8
-0.4
-0.1
-0.6
-0.0
auxotrophy
YNB Glucose
+0.2
-0.4
+0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.1
+0.2
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.5
+0.0
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.3
+0.2
-0.2
-0.3
growth on oleic acid
YNB Oleic Acid
+0.4
-0.1
+0.2
-0.3
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.7
-0.6
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
+0.4
+0.8
-0.1
-0.7
-0.1
growth on ypd
YPD
-0.1
+0.7
+0.2
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.4
-0.2
+0.4
-0.3
+0.0
growth on oleic acid
YNB Glucose
+0.5
-0.0
+0.2
-0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
+0.5
+0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.0
+0.8
+0.1
-0.4
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.1
+0.3
+0.2
-0.2
+0.1
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