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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15956 and 15957 are separated by 192 nucleotides
15957 and 15958 are separated by 82 nucleotides
15958 and 15959 are separated by 83 nucleotides
15959 and 15960 are separated by 241 nucleotides
mRNA_7588: 15956 - Hypothetical Protein, at 623,955 to 629,387
15956
mRNA_7589: 15957 - K19785 POF1 nicotinamide-nucleotide adenylyltransferase, at 629,580 to 630,504
15957
mRNA_7590: 15958 - Hypothetical Protein, at 630,587 to 632,557
15958
mRNA_7591: 15959 - Hypothetical Protein, at 632,641 to 636,261
15959
mRNA_7592: 15960 - Hypothetical Protein, at 636,503 to 637,419
15960
Group
Condition
mRNA
_7588
mRNA
_7589
mRNA
_7590
mRNA
_7591
mRNA
_7592
15956
15957
15958
15959
15960
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
-0.7
+0.2
-0.1
N.D.
auxotrophy
Dropout Complete
-0.7
-0.3
-0.4
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.8
-0.3
-0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.3
+0.2
-0.1
+0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.1
-0.6
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.3
-0.1
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.3
+0.1
+0.1
+0.1
N.D.
auxotrophy
YNB Glucose
-0.4
+0.1
-0.0
-0.2
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
+0.2
-0.3
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
+0.0
+0.2
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.2
-0.2
-0.0
N.D.
growth on ricinoleic acid
YNB Glucose
+0.8
-0.1
-0.7
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.2
-0.2
-0.3
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.4
-0.3
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
-0.0
-0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
-0.6
-0.1
+0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.2
-0.2
+0.1
N.D.
growth on oleic acid
YNB Glucose
-0.0
+0.2
-0.1
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.8
+0.1
-0.4
-0.2
N.D.
growth on ypd
YPD
+0.7
+0.2
-0.2
-0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.5
+0.0
+0.1
N.D.
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